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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927625.1_cds_XP_016475396.1_67333
CDS Infomation

[gene=LOC107797056] [db_xref=GeneID:107797056] [protein=carotene epsilon-monooxygenase, chloroplastic-like] [protein_id=XP_016475396.1] [location=complement(join(64604..64657,64762..64924,65030..65112,65314..65421,65511..65651,66615..66716,68289..68486,68570..68866,70926..71414))] [gbkey=CDS]
Sequence

ATGCCATTTTCACTCACTCTCTCCTCTTTCTCTCTTCTCACTCACCCCACCACCCACCAC
CACCGAACCACCCATCTGGGCCCACTTCCTTATCGTTCACTTTCCGTCAAATCCTCCATA
GACAACAAGAAACCACCTTCTACAAAGCCCAGTTCATGGGTCAGTCCAGATTGGTTAACA
AAACTAACCAGCTCACTTACTTTGGGCCAAAATGATGATTCTAATATACCCATTGCAAGT
GCTCAGCTTGAGGATGTTTCTGAACTATTAGGTGGTGCTCTTTTTCTTCCATTGTTTAAA
TGGATGAATCAGTATGGACCCATTTATCGTCTTGCTGCTGGGCCTAGGAATTTTGTGATT
GTCAGTGATCCTGCTATTGCTAAGCATGTTTTGAAGAATTATGGAAAGTATGGTAAAGGA
CTGGTTGCTGAGGTTTCTGAGTTTTTGTTTGGTTCTGGGTTTGCCATTGCTGAAGGTCCT
CTTTGGACGGCAAGGCGAAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTGTCAGTA
ATAGTTGATCGGGTCTTTTGCAGATGTGCTGAGAGAATGGTGGAGAAACTTACACCTGAT
GCAATTTCTGGCTCTGCAGTAAATATGGAGGCAAAGTTTTCTCAACTAACACTTGATGTT
ATTGGTCTTGCACTCTTCAATTACAATTTTGATTCCCTTACGACTGACAGTCCAGTTATT
GAAGCAGTTTACACTGCGTTAAAAGAAGCAGAACTCCGTTCAACTGATCTGTTGCCGTAT
TGGCAGATCAAAGCCATATGTAAGGTCATCCCACGACAGATAAAGGCCGAAAATGCAGTT
TCTTTAATCAGGCAAACTGTTGAAGAGCTCATTGCAAAGTGCAGAGAGATTGTAGAATCT
GAGGGTGAGAGGATTAATGAGGATGAGTACGTGAATGATAGAGATCCAAGCATCCTTCGA
TTTTTGCTTGCTAGCCGAGAGGAGGTTTCAAGTGTACAACTTCGAGACGATCTTCTATCA
ATGCTAGTTGCTGGGCATGAAACCACAGGTTCAGTTTTGACTTGGACGTCATACCTGCTG
AGTAAGAACCCTTCCTCTTTGAAAAAAGCACATGAAGAAGTTGACAGAGTTTTGGGAGGA
CGCAATCCGACTTATGAAGACATGAGGAATCTCAAGTTCTTGACACGGTGCATAACTGAG
TCACTCCGACTTTATCCACATCCACCTGTTCTAATAAGAAGAGCTCTAGTAGCTGATGTG
CTCCCTGGAAATTACAAGGTCAATGCTGGTCAAGATATAATGATTTCGGTATATAACGTT
CATCATTCTTCAGAGGTATGGGAAAGAGCAGAAGAATTTGATCCTGAAAGATTCGACTCA
GAAGGTCCAGTTCCAAACGAAACGAATACTGACTTTAGATTCATTCCGTTTAGTGGAGGG
CCTCGAAAATGTGTTGGCGATCAATTTGCATTGTTGGAAGCTACAGTTGCTCTTGCAATA
TTTTTGCAGAACTTCTCGTTTGAGTTGATTCCAGATCAAAACATTAGCATGACTACTGGA
GCAACCATTCATACGACAAACGGTTTATACATGAAAGTGAAGCAAAGGCAAAAAGAATCT
GTGTTGGCTGCATGA

Peptide Sequence

PEP ID

XP_016475396.1
PEP Infomation

PREDICTED: carotene epsilon-monooxygenase, chloroplastic-like [Nicotiana tabacum]
Sequence

MPFSLTLSSFSLLTHPTTHHHRTTHLGPLPYRSLSVKSSIDNKKPPSTKPSSWVSPDWLT
KLTSSLTLGQNDDSNIPIASAQLEDVSELLGGALFLPLFKWMNQYGPIYRLAAGPRNFVI
VSDPAIAKHVLKNYGKYGKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHKKYLSV
IVDRVFCRCAERMVEKLTPDAISGSAVNMEAKFSQLTLDVIGLALFNYNFDSLTTDSPVI
EAVYTALKEAELRSTDLLPYWQIKAICKVIPRQIKAENAVSLIRQTVEELIAKCREIVES
EGERINEDEYVNDRDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTSYLL
SKNPSSLKKAHEEVDRVLGGRNPTYEDMRNLKFLTRCITESLRLYPHPPVLIRRALVADV
LPGNYKVNAGQDIMISVYNVHHSSEVWERAEEFDPERFDSEGPVPNETNTDFRFIPFSGG
PRKCVGDQFALLEATVALAIFLQNFSFELIPDQNISMTTGATIHTTNGLYMKVKQRQKES
VLAA

Transcript Sequence

Gene sequence data has not been registered.